Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Gm4968-201ENSMUST00000071458 858 ntBASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rbfox1Q9JJ43 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rbfox1Q9JJ43 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rbfox1Q9JJ43 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rbfox1Q9JJ43 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rbfox1Q9JJ43 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rbfox1Q9JJ43 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rbfox1Q9JJ43 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Gm15375-201ENSMUST00000119510 849 ntBASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rbfox1Q9JJ43 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rbfox1Q9JJ43 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Gm5408-201ENSMUST00000197998 747 ntBASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rbfox1Q9JJ43 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms