Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1fQ9JIS7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1fQ9JIS7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 Mir8098-201ENSMUST00000184011 137 ntBASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1fQ9JIS7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1fQ9JIS7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Gm15372-201ENSMUST00000120729 834 ntBASIC19.58■□□□□ 0.73
Cacna1fQ9JIS7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1fQ9JIS7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1fQ9JIS7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1fQ9JIS7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1fQ9JIS7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cacna1fQ9JIS7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.57■□□□□ 0.72
Cacna1fQ9JIS7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Gm10052-201ENSMUST00000168019 960 ntBASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Gm7729-201ENSMUST00000050143 801 ntBASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1fQ9JIS7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Rprl3-201ENSMUST00000157400 290 ntBASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Gm28659-201ENSMUST00000188013 759 ntBASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1fQ9JIS7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms