Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3bQ9ES34 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Gm27000-201ENSMUST00000182943 842 ntBASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3bQ9ES34 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3bQ9ES34 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gm21559-201ENSMUST00000220638 855 ntBASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gm8587-201ENSMUST00000076538 843 ntBASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gm10566-201ENSMUST00000086739 996 ntBASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Actl10-202ENSMUST00000226583 1501 ntBASIC20.48■□□□□ 0.87
Ube3bQ9ES34 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Gm23634-201ENSMUST00000175071 91 ntBASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ube3bQ9ES34 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Gm27389-201ENSMUST00000183622 195 ntBASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3bQ9ES34 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.45■□□□□ 0.87
Ube3bQ9ES34 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Ube3bQ9ES34 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms