Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Gm7860-201ENSMUST00000121190 879 ntBASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube4bQ9ES00 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Gm43060-201ENSMUST00000200621 289 ntBASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ube4bQ9ES00 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube4bQ9ES00 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube4bQ9ES00 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ube4bQ9ES00 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ube4bQ9ES00 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms