Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Gm15372-201ENSMUST00000120729 834 ntBASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Gm8000-201ENSMUST00000188378 592 ntBASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Mir5131-201ENSMUST00000175426 93 ntBASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-4Q9EQM3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Gm6376-201ENSMUST00000209407 580 ntBASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-4Q9EQM3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.66■□□□□ 0.42
Nkx2-4Q9EQM3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-4Q9EQM3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-4Q9EQM3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-4Q9EQM3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-4Q9EQM3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.64■□□□□ 0.42
Nkx2-4Q9EQM3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx2-4Q9EQM3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms