Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnk1dQ9DC28 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Csnk1dQ9DC28 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnk1dQ9DC28 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Csnk1dQ9DC28 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Csnk1dQ9DC28 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Gm18958-201ENSMUST00000174258 762 ntBASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Csnk1dQ9DC28 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Gm27000-201ENSMUST00000182943 842 ntBASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Mir1668-201ENSMUST00000184114 107 ntBASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Gm18032-201ENSMUST00000222541 538 ntBASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Csnk1dQ9DC28 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms