Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.64■□□□□ 0.9
Chmp4cQ9D7F7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4cQ9D7F7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4cQ9D7F7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Chmp4cQ9D7F7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp4cQ9D7F7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Gm11249-201ENSMUST00000117071 859 ntBASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp4cQ9D7F7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp4cQ9D7F7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Dio3-201ENSMUST00000097228 1449 ntBASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp4cQ9D7F7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Gm29257-201ENSMUST00000186115 639 ntBASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Chmp4cQ9D7F7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp4cQ9D7F7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Gm8969-201ENSMUST00000199694 526 ntBASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp4cQ9D7F7 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.58■□□□□ 0.89
Chmp4cQ9D7F7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp4cQ9D7F7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Chmp4cQ9D7F7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp4cQ9D7F7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.58■□□□□ 0.89
Chmp4cQ9D7F7 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms