Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm45102-201ENSMUST00000207427 857 ntBASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.61■□□□□ 0.41
Sf3a3Q9D554 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a3Q9D554 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3a3Q9D554 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3a3Q9D554 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Gm40848-201ENSMUST00000221998 324 ntBASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sf3a3Q9D554 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Rps24-207ENSMUST00000224568 714 ntBASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3a3Q9D554 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3a3Q9D554 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms