Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33aQ9D2N9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33aQ9D2N9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33aQ9D2N9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33aQ9D2N9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Vps33aQ9D2N9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33aQ9D2N9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33aQ9D2N9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33aQ9D2N9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms