Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk1aQ9D132 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk1aQ9D132 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Gm2399-201ENSMUST00000104944 225 ntBASIC16.35■□□□□ 0.21
Upk1aQ9D132 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Gm6211-202ENSMUST00000167849 925 ntBASIC16.35■□□□□ 0.21
Upk1aQ9D132 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.35■□□□□ 0.21
Upk1aQ9D132 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk1aQ9D132 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Gm7290-201ENSMUST00000104990 617 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Gm12918-201ENSMUST00000120234 636 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Gm15710-201ENSMUST00000121821 636 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Gm5075-201ENSMUST00000196916 622 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.34■□□□□ 0.21
Upk1aQ9D132 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Upk1aQ9D132 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk1aQ9D132 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms