Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cldnd1Q9CQX5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Gm2651-201ENSMUST00000203560 838 ntBASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd1Q9CQX5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cldnd1Q9CQX5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldnd1Q9CQX5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd1Q9CQX5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Golph3-205ENSMUST00000228671 2842 ntBASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd1Q9CQX5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm12644-201ENSMUST00000119935 606 ntBASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm15372-201ENSMUST00000120729 834 ntBASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd1Q9CQX5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms