Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rer1Q9CQU3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rer1Q9CQU3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Mir6349-201ENSMUST00000184059 97 ntBASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Gm10138-203ENSMUST00000206952 366 ntBASIC14.14□□□□□ -0.15
Rer1Q9CQU3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Dio3-201ENSMUST00000097228 1449 ntBASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rer1Q9CQU3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Gm12896-201ENSMUST00000118430 226 ntBASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rer1Q9CQU3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.12□□□□□ -0.15
Rer1Q9CQU3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rer1Q9CQU3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms