Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf138Q9CQE0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf138Q9CQE0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf138Q9CQE0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gm37722-201ENSMUST00000193757 208 ntBASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf138Q9CQE0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rnf138Q9CQE0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms