Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Gm24841-201ENSMUST00000158676 357 ntBASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf8Q99PV0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Gm29518-201ENSMUST00000190858 372 ntBASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf8Q99PV0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf8Q99PV0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf8Q99PV0 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Gm29791-202ENSMUST00000207888 369 ntBASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf8Q99PV0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf8Q99PV0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms