Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim33Q99PP7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim33Q99PP7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim33Q99PP7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim33Q99PP7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim33Q99PP7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim33Q99PP7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim33Q99PP7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim33Q99PP7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.07■□□□□ 0.32
Trim33Q99PP7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.07■□□□□ 0.32
Trim33Q99PP7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim33Q99PP7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.07■□□□□ 0.32
Trim33Q99PP7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.07■□□□□ 0.32
Trim33Q99PP7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim33Q99PP7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.07■□□□□ 0.32
Trim33Q99PP7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.06■□□□□ 0.32
Trim33Q99PP7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Trim33Q99PP7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.05■□□□□ 0.32
Trim33Q99PP7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.05■□□□□ 0.32
Trim33Q99PP7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim33Q99PP7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms