Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim8Q99PJ2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Gm6211-202ENSMUST00000167849 925 ntBASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim8Q99PJ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim8Q99PJ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim8Q99PJ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim8Q99PJ2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim8Q99PJ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Zfp783-201ENSMUST00000095946 670 ntBASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim8Q99PJ2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms