Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Pcdh15Q99PJ1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh15Q99PJ1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Gm15165-201ENSMUST00000118140 502 ntBASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdh15Q99PJ1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Psmb5-202ENSMUST00000227257 622 ntBASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh15Q99PJ1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Gm23935-201ENSMUST00000102303 57 ntBASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Gm24270-201ENSMUST00000102326 57 ntBASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Gm24245-201ENSMUST00000157318 57 ntBASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdh15Q99PJ1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Pcdh15Q99PJ1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh15Q99PJ1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh15Q99PJ1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdh15Q99PJ1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdh15Q99PJ1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh15Q99PJ1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Gm7063-201ENSMUST00000186840 981 ntBASIC19.57■□□□□ 0.72
Pcdh15Q99PJ1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms