Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Gm24841-201ENSMUST00000158676 357 ntBASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtn4rQ99PI8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Gm38027-201ENSMUST00000192315 235 ntBASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4rQ99PI8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rQ99PI8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rQ99PI8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rQ99PI8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rQ99PI8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rQ99PI8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rQ99PI8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Rtn4rQ99PI8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rQ99PI8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms