Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Gm10576-201ENSMUST00000191927 825 ntBASIC17.65■□□□□ 0.42
Cdh23Q99PF4 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh23Q99PF4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh23Q99PF4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh23Q99PF4 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.64■□□□□ 0.42
Cdh23Q99PF4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh23Q99PF4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh23Q99PF4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Gm15467-201ENSMUST00000120582 445 ntBASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh23Q99PF4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh23Q99PF4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh23Q99PF4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Gm6376-201ENSMUST00000209407 580 ntBASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Gm5186-201ENSMUST00000218781 920 ntBASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Gm10175-201ENSMUST00000086013 645 ntBASIC17.61■□□□□ 0.41
Cdh23Q99PF4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh23Q99PF4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Gm14494-201ENSMUST00000118786 435 ntBASIC17.6■□□□□ 0.41
Cdh23Q99PF4 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms