Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf2ird2Q99NI3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf2ird2Q99NI3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf2ird2Q99NI3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.71■□□□□ 0.43
Gtf2ird2Q99NI3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gtf2ird2Q99NI3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gtf2ird2Q99NI3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms