Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hdac9Q99N13 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac9Q99N13 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac9Q99N13 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac9Q99N13 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac9Q99N13 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.3■□□□□ 0.84
Hdac9Q99N13 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac9Q99N13 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hdac9Q99N13 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Gm44771-201ENSMUST00000206975 626 ntBASIC20.29■□□□□ 0.84
Hdac9Q99N13 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac9Q99N13 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.28■□□□□ 0.84
Hdac9Q99N13 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Fst-202ENSMUST00000223640 2612 ntBASIC20.28■□□□□ 0.84
Hdac9Q99N13 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac9Q99N13 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.28■□□□□ 0.84
Hdac9Q99N13 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac9Q99N13 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac9Q99N13 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac9Q99N13 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac9Q99N13 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Olfr129-201ENSMUST00000122318 993 ntBASIC20.26■□□□□ 0.83
Hdac9Q99N13 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hdac9Q99N13 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac9Q99N13 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hdac9Q99N13 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms