Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx6-1Q99MA9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Tgds-204ENSMUST00000228543 1594 ntBASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Gm18733-201ENSMUST00000173950 856 ntBASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx6-1Q99MA9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Gm15794-201ENSMUST00000120182 631 ntBASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx6-1Q99MA9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Gm12895-201ENSMUST00000122214 226 ntBASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx6-1Q99MA9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.1■□□□□ 0.17
Nkx6-1Q99MA9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx6-1Q99MA9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms