Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.12■□□□□ 0.01
Scrt1Q99M85 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scrt1Q99M85 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.11■□□□□ 0.01
Scrt1Q99M85 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scrt1Q99M85 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.1■□□□□ 0.01
Scrt1Q99M85 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scrt1Q99M85 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.09■□□□□ 0.01
Scrt1Q99M85 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm44771-201ENSMUST00000206975 626 ntBASIC15.09■□□□□ 0.01
Scrt1Q99M85 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scrt1Q99M85 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scrt1Q99M85 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scrt1Q99M85 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scrt1Q99M85 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scrt1Q99M85 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.08■□□□□ 0
Scrt1Q99M85 Gm17807-201ENSMUST00000186869 298 ntBASIC15.08■□□□□ 0
Scrt1Q99M85 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Scrt1Q99M85 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Scrt1Q99M85 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scrt1Q99M85 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Scrt1Q99M85 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scrt1Q99M85 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scrt1Q99M85 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms