Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcd2Q99JR8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd2Q99JR8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd2Q99JR8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd2Q99JR8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd2Q99JR8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Olfr129-201ENSMUST00000122318 993 ntBASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd2Q99JR8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcd2Q99JR8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcd2Q99JR8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcd2Q99JR8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms