Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk9Q99J95 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdk9Q99J95 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdk9Q99J95 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cdk9Q99J95 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Cdk9Q99J95 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.39■□□□□ 0.37
Cdk9Q99J95 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdk9Q99J95 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Gm27405-201ENSMUST00000184201 112 ntBASIC17.38■□□□□ 0.37
Cdk9Q99J95 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Gm7291-201ENSMUST00000199147 382 ntBASIC17.38■□□□□ 0.37
Cdk9Q99J95 AV356131-201ENSMUST00000206201 750 ntBASIC17.38■□□□□ 0.37
Cdk9Q99J95 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdk9Q99J95 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk9Q99J95 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.36■□□□□ 0.37
Cdk9Q99J95 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cdk9Q99J95 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk9Q99J95 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms