Protein–RNA interactions for Protein: Q922U1

Prpf3, U4/U6 small nuclear ribonucleoprotein Prp3, mousemouse

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf3Q922U1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Prpf3Q922U1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf3Q922U1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf3Q922U1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf3Q922U1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Prpf3Q922U1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.69■□□□□ 0.74
Prpf3Q922U1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.69■□□□□ 0.74
Prpf3Q922U1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf3Q922U1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Prpf3Q922U1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.68■□□□□ 0.74
Prpf3Q922U1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf3Q922U1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Mir6982-201ENSMUST00000184354 68 ntBASIC19.67■□□□□ 0.74
Prpf3Q922U1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.67■□□□□ 0.74
Prpf3Q922U1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf3Q922U1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.67■□□□□ 0.74
Prpf3Q922U1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.66■□□□□ 0.74
Prpf3Q922U1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf3Q922U1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.65■□□□□ 0.74
Prpf3Q922U1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.65■□□□□ 0.74
Prpf3Q922U1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.65■□□□□ 0.74
Prpf3Q922U1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf3Q922U1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf3Q922U1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf3Q922U1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.64■□□□□ 0.73
Prpf3Q922U1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Prpf3Q922U1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.64■□□□□ 0.73
Prpf3Q922U1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf3Q922U1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms