Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.17■□□□□ 0.5
Pcdha11Q91Y19 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.16■□□□□ 0.5
Pcdha11Q91Y19 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha11Q91Y19 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha11Q91Y19 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha11Q91Y19 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha11Q91Y19 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha11Q91Y19 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Gm17661-201ENSMUST00000170317 270 ntBASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Gm2274-201ENSMUST00000184539 609 ntBASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha11Q91Y19 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Gm18959-201ENSMUST00000208954 655 ntBASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha11Q91Y19 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Il3ra-202ENSMUST00000223589 738 ntBASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha11Q91Y19 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms