Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb20Q91XZ9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Pcdhb20Q91XZ9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb20Q91XZ9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb20Q91XZ9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Gm38114-201ENSMUST00000191877 1232 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Gm36943-201ENSMUST00000194422 282 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Gm45925-201ENSMUST00000218882 744 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Grk6-206ENSMUST00000224995 2971 ntBASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb20Q91XZ9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb20Q91XZ9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb20Q91XZ9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms