Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga9Q91XX9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga9Q91XX9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga9Q91XX9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga9Q91XX9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga9Q91XX9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.06■□□□□ 0.32
Pcdhga9Q91XX9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Gm30025-201ENSMUST00000218555 728 ntBASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms