Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb1Q91XX8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb1Q91XX8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb1Q91XX8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgb1Q91XX8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb1Q91XX8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb1Q91XX8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb1Q91XX8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Pcdhgb1Q91XX8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb1Q91XX8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb1Q91XX8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms