Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgc3Q91XX1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgc3Q91XX1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Gm5874-201ENSMUST00000096101 508 ntBASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgc3Q91XX1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhgc3Q91XX1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgc3Q91XX1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms