Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Gm17661-201ENSMUST00000170317 270 ntBASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgc5Q91XW9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Gm17971-201ENSMUST00000190239 806 ntBASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgc5Q91XW9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgc5Q91XW9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Gm7461-201ENSMUST00000058918 827 ntBASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Tgds-204ENSMUST00000228543 1594 ntBASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgc5Q91XW9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgc5Q91XW9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.59■□□□□ 0.73
Pcdhgc5Q91XW9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Pcdhgc5Q91XW9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 500.3 ms