Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb17Q91VD8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhb17Q91VD8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb17Q91VD8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Pcdhb17Q91VD8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb17Q91VD8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.89■□□□□ 0.46
Pcdhb17Q91VD8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb17Q91VD8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.89■□□□□ 0.46
Pcdhb17Q91VD8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Gm12813-201ENSMUST00000119615 902 ntBASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb17Q91VD8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb17Q91VD8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb17Q91VD8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb17Q91VD8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Gm30025-201ENSMUST00000218555 728 ntBASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb17Q91VD8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms