Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cspg4Q8VHY0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Gm15920-201ENSMUST00000118998 402 ntBASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cspg4Q8VHY0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Mir5126-201ENSMUST00000175513 77 ntBASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Gm29791-202ENSMUST00000207888 369 ntBASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Notumos-201ENSMUST00000151998 2659 ntBASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cspg4Q8VHY0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Gm10052-201ENSMUST00000168019 960 ntBASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Gm7729-201ENSMUST00000050143 801 ntBASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cspg4Q8VHY0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Fst-202ENSMUST00000223640 2612 ntBASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg4Q8VHY0 Gm12895-201ENSMUST00000122214 226 ntBASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg4Q8VHY0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms