Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh18Q8VHR0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh18Q8VHR0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh18Q8VHR0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh18Q8VHR0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Gm13216-201ENSMUST00000117145 591 ntBASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Gm6365-201ENSMUST00000054711 744 ntBASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh18Q8VHR0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms