Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Rab40cQ8VHQ4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40cQ8VHQ4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab40cQ8VHQ4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab40cQ8VHQ4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms