Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpa1Q8VEE4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpa1Q8VEE4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpa1Q8VEE4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpa1Q8VEE4 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpa1Q8VEE4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Gm44487-201ENSMUST00000205145 325 ntBASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpa1Q8VEE4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gm13216-201ENSMUST00000117145 591 ntBASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpa1Q8VEE4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpa1Q8VEE4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms