Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.75■□□□□ 0.43
Rprd1aQ8VDS4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rprd1aQ8VDS4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Gm7638-201ENSMUST00000121348 967 ntBASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rprd1aQ8VDS4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Gm11539-201ENSMUST00000119837 557 ntBASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rprd1aQ8VDS4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms