Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Gm7638-201ENSMUST00000121348 967 ntBASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Gm3375-201ENSMUST00000203929 796 ntBASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap2Q8VC34 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap2Q8VC34 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap2Q8VC34 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.92■□□□□ 0.62
Rpap2Q8VC34 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Gm9731-201ENSMUST00000209480 747 ntBASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap2Q8VC34 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap2Q8VC34 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rpap2Q8VC34 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rpap2Q8VC34 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rpap2Q8VC34 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Il3ra-202ENSMUST00000223589 738 ntBASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms