Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps39Q8R5L3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps39Q8R5L3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps39Q8R5L3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps39Q8R5L3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps39Q8R5L3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps39Q8R5L3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps39Q8R5L3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Gm12441-201ENSMUST00000121806 588 ntBASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms