Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Gm10418-201ENSMUST00000100943 576 ntBASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3kbp1Q8R550 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.79■□□□□ 0.44
Sh3kbp1Q8R550 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3kbp1Q8R550 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Sh3kbp1Q8R550 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3kbp1Q8R550 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3kbp1Q8R550 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3kbp1Q8R550 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3kbp1Q8R550 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3kbp1Q8R550 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Gm12085-201ENSMUST00000119263 940 ntBASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms