Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chrna3Q8R4G9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chrna3Q8R4G9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Chrna3Q8R4G9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.96■□□□□ 0.3
Chrna3Q8R4G9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chrna3Q8R4G9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chrna3Q8R4G9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Chrna3Q8R4G9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chrna3Q8R4G9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms