Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cd109Q8R422 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cd109Q8R422 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cd109Q8R422 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cd109Q8R422 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Cd109Q8R422 Ighv6-1-201ENSMUST00000193612 343 ntBASIC24.5■■□□□ 1.51
Cd109Q8R422 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cd109Q8R422 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Cd109Q8R422 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Cd109Q8R422 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC24.49■■□□□ 1.51
Cd109Q8R422 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Cd109Q8R422 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC24.49■■□□□ 1.51
Cd109Q8R422 Gm7461-201ENSMUST00000058918 827 ntBASIC24.49■■□□□ 1.51
Cd109Q8R422 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC24.49■■□□□ 1.51
Cd109Q8R422 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cd109Q8R422 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Cd109Q8R422 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Zkscan4-202ENSMUST00000225845 1506 ntBASIC24.48■■□□□ 1.51
Cd109Q8R422 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cd109Q8R422 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Cd109Q8R422 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Gm11336-201ENSMUST00000118168 334 ntBASIC24.47■■□□□ 1.51
Cd109Q8R422 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Cd109Q8R422 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cd109Q8R422 Phf7-203ENSMUST00000226565 1971 ntBASIC24.47■■□□□ 1.51
Cd109Q8R422 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Cd109Q8R422 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Cd109Q8R422 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Cd109Q8R422 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC24.46■■□□□ 1.51
Cd109Q8R422 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Cd109Q8R422 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cd109Q8R422 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cd109Q8R422 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
Cd109Q8R422 Gm18115-201ENSMUST00000221209 621 ntBASIC24.45■■□□□ 1.51
Cd109Q8R422 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cd109Q8R422 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
Cd109Q8R422 Spr-ps1-201ENSMUST00000089584 605 ntBASIC24.45■■□□□ 1.51
Cd109Q8R422 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cd109Q8R422 Gm34391-201ENSMUST00000203706 907 ntBASIC24.44■■□□□ 1.5
Cd109Q8R422 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cd109Q8R422 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cd109Q8R422 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cd109Q8R422 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cd109Q8R422 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC24.44■■□□□ 1.5
Cd109Q8R422 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Gm24589-201ENSMUST00000116692 94 ntBASIC24.43■■□□□ 1.5
Cd109Q8R422 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cd109Q8R422 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cd109Q8R422 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cd109Q8R422 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Cd109Q8R422 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cd109Q8R422 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cd109Q8R422 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cd109Q8R422 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms