Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Cgref1Q8R1U2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Gm13146-201ENSMUST00000118508 780 ntBASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cgref1Q8R1U2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Gm43060-201ENSMUST00000200621 289 ntBASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cgref1Q8R1U2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cgref1Q8R1U2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cgref1Q8R1U2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms