Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.36■□□□□ 0.85
Atf7Q8R0S1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf7Q8R0S1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf7Q8R0S1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf7Q8R0S1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Gm37025-201ENSMUST00000195159 829 ntBASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Atf7Q8R0S1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atf7Q8R0S1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Atf7Q8R0S1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Atf7Q8R0S1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atf7Q8R0S1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Gm17661-201ENSMUST00000170317 270 ntBASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf7Q8R0S1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Gm12085-201ENSMUST00000119263 940 ntBASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Atf7Q8R0S1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms