Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Mir1199-201ENSMUST00000117015 119 ntBASIC16.3■□□□□ 0.2
Clrn1Q8K445 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.3■□□□□ 0.2
Clrn1Q8K445 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.3■□□□□ 0.2
Clrn1Q8K445 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clrn1Q8K445 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clrn1Q8K445 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clrn1Q8K445 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clrn1Q8K445 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.27■□□□□ 0.2
Clrn1Q8K445 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clrn1Q8K445 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clrn1Q8K445 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clrn1Q8K445 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.26■□□□□ 0.19
Clrn1Q8K445 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.26■□□□□ 0.19
Clrn1Q8K445 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms