Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cystm1Q8K353 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.85□□□□□ -0.67
Cystm1Q8K353 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cystm1Q8K353 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC10.84□□□□□ -0.67
Cystm1Q8K353 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cystm1Q8K353 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cystm1Q8K353 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Gm16401-202ENSMUST00000197463 2074 ntBASIC10.83□□□□□ -0.68
Cystm1Q8K353 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cystm1Q8K353 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cystm1Q8K353 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms