Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm13884-201ENSMUST00000118103 829 ntBASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Gm45328-201ENSMUST00000210942 917 ntBASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shtn1Q8K2Q9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.33■□□□□ 0.84
Shtn1Q8K2Q9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shtn1Q8K2Q9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Fst-202ENSMUST00000223640 2612 ntBASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Gm27459-201ENSMUST00000184860 107 ntBASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Gm28659-201ENSMUST00000188013 759 ntBASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Shtn1Q8K2Q9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Shtn1Q8K2Q9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shtn1Q8K2Q9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shtn1Q8K2Q9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shtn1Q8K2Q9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Shtn1Q8K2Q9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shtn1Q8K2Q9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms