Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Gm20049-201ENSMUST00000219950 730 ntBASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cchcr1Q8K2I2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Gm12441-201ENSMUST00000121806 588 ntBASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cchcr1Q8K2I2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Gm27275-201ENSMUST00000184318 272 ntBASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Gm18666-201ENSMUST00000190039 958 ntBASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cchcr1Q8K2I2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.41■□□□□ 0.86
Cchcr1Q8K2I2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Gm42545-201ENSMUST00000202755 922 ntBASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cchcr1Q8K2I2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cchcr1Q8K2I2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cchcr1Q8K2I2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cchcr1Q8K2I2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cchcr1Q8K2I2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms