Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp1Q8K021 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Gm45058-201ENSMUST00000205810 766 ntBASIC16.91■□□□□ 0.3
Scamp1Q8K021 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp1Q8K021 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp1Q8K021 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Scamp1Q8K021 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.89■□□□□ 0.29
Scamp1Q8K021 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Gm6659-201ENSMUST00000174752 547 ntBASIC16.89■□□□□ 0.29
Scamp1Q8K021 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp1Q8K021 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.88■□□□□ 0.29
Scamp1Q8K021 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp1Q8K021 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.88■□□□□ 0.29
Scamp1Q8K021 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scamp1Q8K021 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scamp1Q8K021 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms